Robustness and fragility of Boolean models for genetic regulatory networks
From MaRDI portal
Publication:2196807
DOI10.1016/J.JTBI.2005.01.023zbMath1445.92173arXivq-bio/0501037OpenAlexW2160145365WikidataQ51974422 ScholiaQ51974422MaRDI QIDQ2196807
Publication date: 3 September 2020
Published in: Journal of Theoretical Biology (Search for Journal in Brave)
Full work available at URL: https://arxiv.org/abs/q-bio/0501037
Related Items (45)
Logical analysis of the budding yeast cell cycle ⋮ Reliability of regulatory networks and its evolution ⋮ Uncovering operational interactions in genetic networks using asynchronous Boolean dynamics ⋮ Observability of Boolean networks: a graph-theoretic approach ⋮ Bifurcation analysis of a mathematical model for genetic regulatory network with time delays ⋮ Inferring intracellular signal transduction circuitry from molecular perturbation experiments ⋮ Dynamics of influenza virus and human host interactions during infection and replication cycle ⋮ Structural analysis in biology: a control-theoretic approach ⋮ On detectability of Boolean control networks ⋮ Asymptotic stability in probability for stochastic Boolean networks ⋮ Stability analysis of the differential genetic regulatory networks model with time-varying delays and Markovian jumping parameters ⋮ Interpolative Boolean networks ⋮ Event-triggered mechanism of designing set stabilization state feedback controller for switched Boolean networks ⋮ Boolean dynamics revisited through feedback interconnections ⋮ Comparison of stationary and oscillatory dynamics described by differential equations and Boolean maps in transcriptional regulatory circuits ⋮ Combinatorics on update digraphs in Boolean networks ⋮ Stability analysis for genetic regulatory networks with delays: the continuous-time case and the discrete-time case ⋮ Bisimulations of Boolean Control Networks ⋮ Global dynamics for switching systems and their extensions by linear differential equations ⋮ Controllability of Boolean control networks via the Perron-Frobenius theory ⋮ Superstability of the yeast cell-cycle dynamics: ensuring causality in the presence of biochemical stochasticity ⋮ Computational challenges in systems biology ⋮ On disturbance decoupling problem of Boolean control networks ⋮ Dynamic regimes of random fuzzy logic networks ⋮ Stability of uncertain impulsive stochastic genetic regulatory networks with time-varying delay in the leakage term ⋮ Attractor analysis of asynchronous Boolean models of signal transduction networks ⋮ Dynamical properties of a two-gene network with hysteresis ⋮ Dynamics in piecewise linear and continuous models of complex switching networks ⋮ Reachability of higher-order logical control networks via matrix method ⋮ A survey of gene regulatory networks modelling methods: from differential equations, to Boolean and qualitative bioinspired models ⋮ Dynamically consistent reduction of logical regulatory graphs ⋮ Parameter estimation for Boolean models of biological networks ⋮ Introduction to Focus Issue: Quantitative Approaches to Genetic Networks ⋮ An effective network reduction approach to find the dynamical repertoire of discrete dynamic networks ⋮ ``Immunetworks, intersecting circuits and dynamics ⋮ Computational methods for asynchronous basins ⋮ Molecular systems biology and control ⋮ Mapping multivalued onto Boolean dynamics ⋮ Chaotic gene regulatory networks can be robust against mutations and noise ⋮ Encoding Boolean networks into reaction systems for investigating causal dependencies in gene regulation ⋮ Controllability and observability of Boolean networks arising from biology ⋮ Necessary and sufficient vertex partition conditions for input-output decoupling of Boolean control networks ⋮ Cascading state-space decomposition of Boolean control networks by nested method ⋮ Combinatorial Representation of Parameter Space for Switching Networks ⋮ Reduction and Analysis of Boolean Control Networks by Bisimulation
Cites Work
- Unnamed Item
- Qualitative simulation of genetic regulatory networks using piecewise-linear models
- The topology of the regulatory interactions predicts the expression pattern of the segment polarity genes in \textit{Drosophila melanogaster}
- Application of formal methods to biological regulatory networks: extending Thomas' asynchronous logical approach with temporal logic
- How gap genes make their domains: An analytical study based on data driven approximations
This page was built for publication: Robustness and fragility of Boolean models for genetic regulatory networks