A microscopic interpretation for adaptive dynamics trait substitution sequence models

DOI10.1016/J.SPA.2006.01.004MaRDI QIDQ2507645zbMATH OpenOpenAlexFDO

Authors Nicolas Champagnat

Publication date 5 October 2006

Published in Stochastic Processes and their Applications (Search for Journal in Brave)

Full work available at URL https://arxiv.org/abs/math/0512063

zbMATH Keywords

adaptive dynamicsbranching processesDarwinian evolutionfinite-dimensional distributions convergenceinteracting particle systemlarge deviationsmeasure-valued processmutation-selection processesstochastic dominationtime-scale separation

Mathematics Subject Classification ID

Limit theorems in probability theory (60F99) Interacting random processes; statistical mechanics type models; percolation theory (60K35) Problems related to evolution (92D15)

Abstract: We consider an interacting particle Markov process for Darwinian evolution in an asexual population with non-constant population size, involving a linear birth rate, a density-dependent logistic death rate, and a probability $mu$ of mutation at each birth event. We introduce a renormalization parameter $K$ scaling the size of the population, which leads, when $Ko+infty$, to a deterministic dynamics for the density of individuals holding a given trait. By combining in a non-standard way the limits of large population ($Ko+infty$) and of small mutations ($muo0$), we prove that a time scales separation between the birth and death events and the mutation events occurs and that the interacting particle microscopic process converges for finite dimensional distributions to the biological model of evolution known as the ``monomorphic trait substitution sequence model of adaptive dynamics, which describes the Darwinian evolution in an asexual population as a Markov jump process in the trait space.

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Cites work

• A microscopic probabilistic description of a locally regulated population and macroscopic approximations
• Adaptive dynamics and evolutionary stability
• Adaptive dynamics, a geometrical study of the consequences of nearly faithful reproduction
• Approximating selective sweeps
• scientific article; zbMATH DE number 3826915 (Why is no real title available?)
• scientific article; zbMATH DE number 3951715 (Why is no real title available?)
• scientific article; zbMATH DE number 1153603 (Why is no real title available?)
• scientific article; zbMATH DE number 3274494 (Why is no real title available?)
• scientific article; zbMATH DE number 3410334 (Why is no real title available?)
• Introduction to mathematical modeling for life sciences
• The dynamical theory of coevolution: A derivation from stochastic ecological processes
• Using moment equations to understand stochastically driven spatial pattern formation in ecological systems

Cited in

(86)

• Stochastic dynamics for adaptation and evolution of microorganisms
• The polymorphic evolution sequence for populations with phenotypic plasticity
• The effect of recurrent mutations on genetic diversity in a large population of varying size
• A numerical approach to determine mutant invasion fitness and evolutionary singular strategies
• Impact of demography on extinction/fixation events
• A stochastic model for speciation by mating preferences
• A universal scaling law determines time reversibility and steady state of substitutions under selection
• The recovery of a recessive allele in a Mendelian diploid model
• Invasion probabilities, hitting times, and some fluctuation theory for the stochastic logistic process
• Phenotypic lag and population extinction in the moving-optimum model: insights from a small-jumps limit
• From stochastic, individual-based models to the canonical equation of adaptive dynamics in one step
• Survival of a recessive allele in a Mendelian diploid model
• An eco-evolutionary approach of adaptation and recombination in a large population of varying size
• The interplay of dormancy and transfer in bacterial populations: invasion, fixation and coexistence regimes
• Dynamics of lineages in adaptation to a gradual environmental change
• Building a synthetic basis for kin selection and evolutionary game theory using population genetics
• A simple Markovian individual-based model as a means of understanding forest dynamics
• Invasion and fixation of microbial dormancy traits under competitive pressure
• The eco-evolutionary modelling of populations and their traits using a measure of trait differentiation
• Stochastic analysis of emergence of evolutionary cyclic behavior in population dynamics with transfer
• Stochastic individual-based models with power law mutation rate on a general finite trait space
• Direct competition results from strong competition for limited resource
• Maintenance of diversity in a hierarchical host-parasite model with balancing selection and reinfection
• On time scales and quasi-stationary distributions for multitype birth-and-death processes
• Crossing a fitness valley as a metastable transition in a stochastic population model
• A birth-death model of ageing: from individual-based dynamics to evolutive differential inclusions
• From adaptive dynamics to adaptive walks
• Model of phenotypic evolution in hermaphroditic populations
• The hitchhiker's guide to adaptive dynamics
• A simple mathematical model of gradual Darwinian evolution: emergence of a Gaussian trait distribution in adaptation along a fitness gradient
• Adaptation in a stochastic multi-resources chemostat model
• Evolution of discrete populations and the canonical diffusion of adaptive dynamics
• Unifying evolutionary dynamics: from individual stochastic processes to macroscopic models
• Probability of fixation under weak selection: a branching process unifying approach
• A compact containment result for nonlinear historical superprocess approximations for population models with trait-dependence
• Social evolution and genetic interactions in the short and long term
• Stochastic eco-evolutionary model of a prey-predator community
• An individual-based model for the Lenski experiment, and the deceleration of the relative fitness
• Multiscale analysis of adaptive population dynamics.
• Links between deterministic and stochastic approaches for invasion in growth-fragmentation-death models
• The effect of competition and horizontal trait inheritance on invasion, fixation, and polymorphism
• Individual-based probabilistic models of adaptive evolution and various scaling approximations
• From Individual Stochastic Processes to Macroscopic Models in Adaptive Evolution
• Population Dynamics and Random Genealogies
• A rigorous model study of the adaptive dynamics of Mendelian diploids
• A new proof for the convergence of an individual based model to the trait substitution sequence
• Stochasticity in the adaptive dynamics of evolution: the bare bones
• Random Modeling of Adaptive Dynamics and Evolutionary Branching
• Stochastic stability and the evolution of coordination in spatially structured populations
• Influence of a spatial structure on the long time behavior of a competitive Lotka-Volterra type system
• Weak convergence of a mass-structured individual-based model
• Trait substitution trees on two time scales analysis
• The interplay of two mutations in a population of varying size: A stochastic eco-evolutionary model for clonal interference
• On \(\Lambda\)-Fleming-Viot processes with general frequency-dependent selection
• Stochastic modeling of density-dependent diploid populations and the extinction vortex
• scientific article; zbMATH DE number 4193512 (Why is no real title available?)
• Genealogies of two linked neutral loci after a selective sweep in a large population of stochastically varying size
• On the large-time behaviour of the solution of a stochastic differential equation driven by a Poisson point process
• Evolutive two-level population process and large population approximations
• The evolutionary limit for models of populations interacting competitively via several resources
• Fluctuation limits of a locally regulated population and generalized Langevin equations
• scientific article; zbMATH DE number 7328138 (Why is no real title available?)
• scientific article; zbMATH DE number 7662455 (Why is no real title available?)
• Measure framework for the pure selection equation: global well posedness and numerical investigations
• Filling the gap between individual-based evolutionary models and Hamilton-Jacobi equations
• Scaling limit of an adaptive contact process
• Existence, uniqueness and ergodicity for the centered Fleming-Viot process
• Multiscale eco-evolutionary models: from individuals to populations
• Polymorphic evolution sequence and evolutionary branching
• A mathematical framework for evo-devo dynamics
• A general multi-scale description of metastable adaptive motion across fitness valleys
• Sharp approximation and hitting times for stochastic invasion processes
• Dormancy in stochastic population models
• Convergence of an infinite dimensional stochastic process to a spatially structured trait substitution sequence
• Condensation in Fleming-Viot particle systems with fast selection mechanism
• From clonal interference to Poissonian interacting trajectories
• Convergence of population processes with small and frequent mutations to the canonical equation of adaptive dynamics
• Effective growth rates in a periodically changing environment: from mutation to invasion
• Rare events analysis and computation for stochastic evolution of bacterial populations
• Emergence of microbial host dormancy during a persistent virus epidemic
• Evolution of a trait distributed over a large fragmented population: propagation of chaos meets adaptive dynamics
• Trait substitution sequence process and canonical equation for age-structured populations
• Microsatellite evolution: Markov transition functions for a suite of models
• Stochastic dynamics of adaptive trait and neutral marker driven by eco-evolutionary feedbacks
• Slow-fast stochastic diffusion dynamics and quasi-stationarity for diploid populations with varying size
• Adaptive dynamics for physiologically structured population models

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