Comparative gene finding. Models, algorithms and implementation

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DOI10.1007/978-1-4471-6693-1MaRDI QIDQ5919782zbMATH OpenOpenAlexFDO

Authors Marina Axelson-Fisk

Publication date 15 July 2015

Published in Computational Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/978-1-4471-6693-1


zbMATH Keywords

decision treesdynamic programminggene findinggene structure submodelsgeneralized hidden Markov modelshidden Markov modelsinterpolated Markov modelsmultiple sequence alignmentneural networksnext generation sequencingpairwise sequence alignmentsequence alignmentssimilarity based gene findingViterbi algorithm

Mathematics Subject Classification ID

Computational methods in Markov chains (60J22) Dynamic programming (90C39) Research exposition (monographs, survey articles) pertaining to biology (92-02) Computational methods for problems pertaining to biology (92-08) Neural networks for/in biological studies, artificial life and related topics (92B20) Biochemistry, molecular biology (92C40) Genetics and epigenetics (92D10)




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