Cited in
(74)- Predicting regions prone to protein aggregation based on SVM algorithm
- Multiple biological sequence alignment. Scoring functions, algorithms and evaluation
- A parallel algorithm for the constrained multiple sequence alignment problem designed for GPUs
- Large-Scale Multiple Sequence Alignment and Phylogeny Estimation
- Multiobjective artificial fish swarm algorithm for multiple sequence alignment
- BioJava
- BIONJ
- MAFFT
- Balibase
- 3DCoffee
- ClustalW
- DIALIGN
- MSAProbs
- ProbCons
- DIALIGN-TX
- MUMMALS
- LAGAN
- LTR_FINDER
- MUSCLE
- Repseek
- T-coffee
- Varun
- NAST
- PROMALS3D
- Mugsy
- Statalign
- PartTree
- SABmark
- RIATA-HGT
- AWTY
- SeqAn
- AGGRESCAN
- PROMALS
- Bio++
- BMGE
- GENCODE
- M-Coffee
- iGTP
- OXBench
- ProtTest 3
- AlexSys
- AQUA
- Facet
- iRMSD
- Mauve
- Opal
- PCMA
- PMFastR
- Probalign
- ReAligner
- RASCAL
- STRIKE
- TCS
- OrthoMCL
- MAGRE
- Zyggregator
- AMYPdb
- MADMX
- COBALT
- FASTSP
- GapCoder
- Gegenees
- MSACompro
- POY
- SATCHMO-JS
- SPEM
- DBA
- Bayesian modelling of compositional heterogeneity in molecular phylogenetics
- An overview of multiple sequence alignments and cloud computing in bioinformatics
- A global averaging method for dynamic time warping, with applications to clustering
- Summarizing a set of time series by averaging: from Steiner sequence to compact multiple alignment
- \textsc{Rime}: repeat identification
- Edlib
- Bioinformatics. Volume I. Data, sequence analysis, and evolution
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