| Publication | Date of Publication | Type |
|---|
| A computational framework for weighted simplicial homology | 2025-01-10 | Paper |
| Lipschitz continuity under toric equivalence for asynchronous Boolean networks | 2024-07-16 | Paper |
| D-chain tomography of networks: a new structure spectrum and an application to the SIR process | 2024-07-01 | Paper |
| RNA secondary structures with given motif specification: combinatorics and algorithms | 2023-03-07 | Paper |
| The arithmetic topology of genetic alignments | 2023-02-15 | Paper |
| Loop homology of bi-secondary structures. II | 2022-10-04 | Paper |
| A computational framework for weighted simplicial homology | 2022-06-09 | Paper |
| On Weighted Simplicial Homology | 2022-05-06 | Paper |
| Loop homology of bi-secondary structures | 2021-04-28 | Paper |
| The energy-spectrum of bicompatible sequences | 2019-09-30 | Paper |
| On an enhancement of RNA probing data using Information Theory | 2019-09-12 | Paper |
| The block spectrum of RNA pseudoknot structures | 2019-08-01 | Paper |
| Statistics of canonical RNA pseudoknot structures | 2018-10-16 | Paper |
| D-chain tomography of networks: a new structure spectrum and an application to the SIR process | 2018-10-12 | Paper |
| Neutral networks of sequence to shape maps | 2018-10-08 | Paper |
| Central and local limit theorems for RNA structures | 2018-10-08 | Paper |
| The rainbow spectrum of RNA secondary structures | 2018-09-05 | Paper |
| Linear sequential dynamical systems, incidence algebras, and Möbius functions | 2018-06-20 | Paper |
| From unicellular fatgraphs to trees | 2018-06-08 | Paper |
| Garden-of-Eden states and fixed points of monotone dynamical systems | 2018-05-08 | Paper |
| Genetic robustness of let-7 miRNA sequence-structure pairs | 2018-01-11 | Paper |
| An efficient dual sampling algorithm with Hamming distance filtration | 2017-10-31 | Paper |
| On the local genus distribution of graph embeddings | 2017-08-16 | Paper |
| The boundary length and point spectrum enumeration of partial chord diagrams using cut and join recursion | 2017-07-24 | Paper |
| A topological framework for signed permutations | 2017-06-23 | Paper |
| Statistics of topological RNA structures | 2017-06-14 | Paper |
| The evolution of the random reversal graph | 2017-06-08 | Paper |
| Fatgraph models of RNA structure | 2017-04-25 | Paper |
| https://portal.mardi4nfdi.de/entity/Q2963483 | 2017-02-14 | Paper |
| Topological language for RNA | 2016-11-21 | Paper |
| Plane Permutations and Applications to a Result of Zagier--Stanley and Distances of Permutations | 2016-09-06 | Paper |
| RNA Secondary Structures | 2016-06-10 | Paper |
| RNA secondary structures having a compatible sequence of certain nucleotide ratios | 2016-03-11 | Paper |
| On a lower bound for sorting signed permutations by reversals | 2016-02-01 | Paper |
| Shapes of topological RNA structures | 2015-12-28 | Paper |
| Sequence-structure relations of biopolymers | 2015-11-10 | Paper |
| Replication and mutation on neutral networks | 2015-10-27 | Paper |
| New formulas counting one-face maps and Chapuy's recursion | 2015-10-16 | Paper |
| On RNA-RNA interaction structures of fixed topological genus | 2015-05-15 | Paper |
| Variation of the local topological structure of graph embeddings | 2015-03-04 | Paper |
| A simple framework on sorting permutations | 2015-02-27 | Paper |
| On plane permutations | 2014-11-20 | Paper |
| A bijection for tricellular maps | 2014-11-12 | Paper |
| Narayana polynomials and some generalizations | 2014-11-10 | Paper |
| A combinatorial interpretation of the $\kappa^{\star}_{g}(n)$ coefficients | 2014-06-12 | Paper |
| Shapes of interacting RNA complexes | 2014-05-14 | Paper |
| Generation of RNA pseudoknot structures with topological genus filtration | 2014-02-27 | Paper |
| Topological classification and enumeration of RNA structures by genus | 2013-11-11 | Paper |
| On the genus filtration of diagrams over two backbones | 2013-11-04 | Paper |
| Topological recursion for chord diagrams, RNA complexes, and cells in moduli spaces | 2013-05-08 | Paper |
| Enumeration of RNA complexes via random matrix theory | 2013-03-06 | Paper |
| The topological filtration of \(\gamma\)-structures | 2013-01-30 | Paper |
| A bijection between unicellular and bicellular maps | 2013-01-30 | Paper |
| https://portal.mardi4nfdi.de/entity/Q2906537 | 2012-09-05 | Paper |
| A phase transition in energy-filtered RNA secondary structures | 2012-05-16 | Paper |
| Random induced subgraphs of Cayley graphs induced by transpositions | 2012-04-13 | Paper |
| Combinatorics of RNA-RNA interaction | 2012-02-24 | Paper |
| Symmetric circular matchings and RNA folding | 2012-01-11 | Paper |
| On the combinatorics of sparsification | 2011-12-31 | Paper |
| Topology of RNA-RNA interaction structures | 2011-12-28 | Paper |
| Combinatorics of $\gamma$-structures | 2011-12-18 | Paper |
| Combinatorial analysis of interacting RNA molecules | 2011-11-22 | Paper |
| The 5'-3' distance of RNA secondary structures | 2011-04-17 | Paper |
| Random k -noncrossing RNA structures | 2011-01-24 | Paper |
| On the uniform generation of modular diagrams | 2010-12-16 | Paper |
| Linear chord diagrams on two intervals | 2010-10-28 | Paper |
| Enumeration of linear chord diagrams | 2010-10-27 | Paper |
| Combinatorial Computational Biology of RNA | 2010-09-10 | Paper |
| Modular, \(k\)-noncrossing diagrams | 2010-06-16 | Paper |
| RNA pseudoknot structures with arc-length \(\geq 3\) and stack-length \(\geq \sigma \) | 2010-05-05 | Paper |
| Irreducibility in RNA structures | 2010-04-12 | Paper |
| RNA-RNA interaction prediction based on multiple sequence alignments | 2010-03-21 | Paper |
| Inverse Folding of RNA Pseudoknot Structures | 2010-03-09 | Paper |
| Loops in canonical RNA pseudoknot structures | 2009-12-02 | Paper |
| Random $k$-noncrossing partitions | 2009-11-16 | Paper |
| On the decomposition of \(k\)-noncrossing RNA structures | 2009-11-13 | Paper |
| Random 3-noncrossing partitions | 2009-10-14 | Paper |
| Local connectivity of neutral networks | 2009-09-18 | Paper |
| Target prediction and a statistical sampling algorithm for RNA-RNA interaction | 2009-08-05 | Paper |
| Large components in random induced subgraphs of \(n\)-cubes | 2009-06-23 | Paper |
| Shapes of RNA pseudoknot structures | 2009-06-22 | Paper |
| Stacks in canonical RNA pseudoknot structures | 2009-06-18 | Paper |
| A generalization of the brauer algebra | 2009-06-18 | Paper |
| Inverse folding of RNA pseudoknot structures | 2009-05-05 | Paper |
| Crossings and nestings in tangled diagrams | 2009-04-07 | Paper |
| Efficient counting and asymptotics of \(k\)-noncrossing tangled diagrams | 2009-04-07 | Paper |
| RNA-RNA interaction prediction: partition function and base pair pairing probabilities | 2009-03-19 | Paper |
| Combinatorial design of pseudoknot RNA | 2009-03-02 | Paper |
| https://portal.mardi4nfdi.de/entity/Q3597158 | 2009-02-09 | Paper |
| Folding 3-noncrossing RNA pseudoknot structures | 2008-09-28 | Paper |
| Asymptotic enumeration of RNA structures with pseudoknots | 2008-09-08 | Paper |
| Canonical RNA pseudoknot structures | 2008-06-14 | Paper |
| ON A NEW CLASS OF LOAD BALANCING NETWORK PROTOCOLS | 2008-05-28 | Paper |
| Combinatorics of RNA structures with pseudoknots | 2008-04-22 | Paper |
| Pseudoknot RNA structures with arc-length $\ge 4$ | 2008-03-10 | Paper |
| Asymptotic analysis of $k$-noncrossing matchings | 2008-03-06 | Paper |
| Combinatorics of sequential dynamical systems | 2008-01-28 | Paper |
| On $k$-noncrossing partitions | 2007-10-26 | Paper |
| A combinatorial framework for RNA tertiary interaction | 2007-10-18 | Paper |
| Sequential dynamical systems over words | 2007-05-24 | Paper |
| An introduction to sequential dynamical systems | 2007-01-10 | Paper |
| https://portal.mardi4nfdi.de/entity/Q3410834 | 2006-11-16 | Paper |
| ON ASYNCHRONOUS CELLULAR AUTOMATA | 2006-03-13 | Paper |
| NEUTRAL EVOLUTION AND MUTATION RATES OF SEQUENTIAL DYNAMICAL SYSTEMS | 2005-09-05 | Paper |
| On certain morphisms of sequential dynamical systems | 2005-08-17 | Paper |
| REDUCTION OF DISCRETE DYNAMICAL SYSTEMS OVER GRAPHS | 2005-04-22 | Paper |
| Distance-2-matchings of random graphs | 2004-12-13 | Paper |
| Covering maps over \(n\)-cubes | 2003-08-14 | Paper |
| https://portal.mardi4nfdi.de/entity/Q4792913 | 2003-06-13 | Paper |
| Discrete, sequential dynamical systems | 2003-02-06 | Paper |
| Elements of a theory of simulation. III: Equivalence of SDS. | 2003-01-28 | Paper |
| ETS IV: Sequential dynamical systems: fixed points, invertibility and equivalence | 2003-01-28 | Paper |
| On acyclic orientations and sequential dynamical systems | 2002-07-04 | Paper |
| Combinatorial Landscapes | 2002-04-15 | Paper |
| https://portal.mardi4nfdi.de/entity/Q4258091 | 2001-12-06 | Paper |
| Random subgraphs of Cayley graphs over \(p\)-groups | 2001-07-09 | Paper |
| Neutrality in fitness landscapes. | 2001-04-25 | Paper |
| Random structures | 2001-04-17 | Paper |
| Elements of a theory of simulation. II: Sequential dynamical systems. | 2000-06-25 | Paper |
| Elements of a theory of computer simulation. I | 1999-11-29 | Paper |
| Generic properties of combinatory maps: Neutral networks of RNA secondary structures | 1999-10-18 | Paper |
| Acyclic orientations of random graphs | 1998-11-11 | Paper |
| Random induced subgraphs of generalized \(n\)-cubes | 1997-11-19 | Paper |
| https://portal.mardi4nfdi.de/entity/Q4877116 | 1996-05-06 | Paper |
