Coalescent theory. An introduction
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(only showing first 100 items - show all)- Coalescent models derived from birth-death processes
- Tokunaga and Horton self-similarity for level set trees of Markov chains
- Evolutionary multiplayer games
- The existence and abundance of ghost ancestors in biparental populations
- Probability and manipulation: evolution and simulation in applied population genetics
- Exchangeable and sampling-consistent distributions on rooted binary trees
- Single-crossover recombination and ancestral recombination trees
- Strategy abundance in evolutionary many-player games with multiple strategies
- A probabilistic view on the deterministic mutation-selection equation: dynamics, equilibria, and ancestry via individual lines of descent
- Limiting distribution of X-chromosomal coalescence times under first-cousin consanguineous mating
- Population growth combined with wide offspring distributions can increase fixation rate and reduce genetic diversity
- Multivariate phase-type theory for the site frequency spectrum
- A game-theoretical dynamic imitation model on networks
- Global migration can lead to stronger spatial selection than local migration
- The largest strongly connected component in the cyclical pedigree model of Wakeley et al.
- Strong seed-bank effects in bacterial evolution
- Evolution in range expansions with competition at rough boundaries
- Population structure and coalescence in pedigrees: comparisons to the structured coalescent and a framework for inference
- Fixation probabilities of strategies for bimatrix games in finite populations
- Inference in population genetics using forward and backward, discrete and continuous time processes
- Phase-type distributions in population genetics
- Statistical tools for seed bank detection
- Theories of population variation in genes and genomes
- Game-theoretical approach for opinion dynamics on social networks
- Forward and backward evolutionary processes and allele frequency spectrum in a cancer cell population
- On the joint distribution of tree height and tree length under the coalescent
- The process of most recent common ancestors in an evolving coalescent
- Lineages-through-time plots of neutral models for speciation
- A mathematical formalism for natural selection with arbitrary spatial and genetic structure
- Social evolution and genetic interactions in the short and long term
- Mathematical population genetics. I: Theoretical introduction.
- Spectral neighbor joining for reconstruction of latent tree models
- Variances and covariances of linear summary statistics of segregating sites
- Convergence to the structured coalescent process
- Local fluctuations of genetic processes defined on two time scales, with applications to effective size estimation
- Identifiability of phylogenetic parameters from k-mer data under the coalescent
- Identifying species network features from gene tree quartets under the coalescent model
- An ancestral process with selection in an ecological community
- Variance and limiting distribution of coalescence times in a diploid model of a consanguineous population
- Effective population size in simple infectious disease models
- The evolving Moran genealogy
- The third moments of the site frequency spectrum
- Linearization of the Kingman coalescent
- Inferring the demographic history from DNA sequences: an importance sampling approach based on non-homogeneous processes
- An individual-based model for the Lenski experiment, and the deceleration of the relative fitness
- How mutation affects evolutionary games on graphs
- Prosperity is associated with instability in dynamical networks
- Topological linkage disequilibrium calculated from coalescent genealogies
- The Wright-Fisher site frequency spectrum as a perturbation of the coalescent's
- Enumeration of binary trees compatible with a perfect phylogeny
- Spatially explicit neutral models for population genetics and community ecology: extensions of the Neyman-Scott clustering process
- Non-parametric estimation of population size changes from the site frequency spectrum
- A compendium of covariances and correlation coefficients of coalescent tree properties
- Markov genealogy processes
- The coalescent tree of a Markov branching process with generalised logistic growth
- scientific article; zbMATH DE number 2126323 (Why is no real title available?)
- A non-zero variance of Tajima's estimator for two sequences even for infinitely many unlinked loci
- Epistasis can increase multivariate trait diversity in haploid non-recombining populations
- Zig-Zag Sampling for Discrete Structures and Nonreversible Phylogenetic MCMC
- Site pattern probabilities under the multispecies coalescent and a relaxed molecular clock: theory and applications
- An analytical framework in the general coalescent tree setting for analyzing polymorphisms created by two mutations
- Time to extinction of a cultural trait in an overlapping generation model
- Partitioning, duality, and linkage disequilibria in the Moran model with recombination
- Additive genetic variation and evolvability of a multivariate trait can be increased by epistatic gene action
- Looking down in the ancestral selection graph: a probabilistic approach to the common ancestor type distribution
- Editorial: Coalescent theory has many new branches
- Statistical challenges in tracking the evolution of SARS-CoV-2
- Separation of timescales for the seed bank diffusion and its jump-diffusion limit
- Developments in coalescent theory from single loci to chromosomes
- The internal branch lengths of the Kingman coalescent
- Tree lengths for general \(\Lambda \)-coalescents and the asymptotic site frequency spectrum around the Bolthausen-Sznitman coalescent
- Competing islands limit the rate of adaptation in structured populations
- The effect of inbreeding constraints and offspring distribution on time to the most recent common ancestor
- Genealogy of a Wright-Fisher Model with Strong SeedBank Component
- The conditional ancestral selection graph with strong balancing selection
- The ubiquitous Ewens sampling formula
- Multiple merger gene genealogies in two species: monophyly, paraphyly, and polyphyly for two examples of lambda coalescents
- Time to the MRCA of a sample in a Wright-Fisher model with variable population size
- Inference in two dimensions: allele frequencies versus lengths of shared sequence blocks
- On the size distribution of private microsatellite alleles
- On the enumeration of leaf-labeled increasing trees with arbitrary node-degree
- On spatial coalescents with multiple mergers in two dimensions
- Recursions for the exchangeable partition function of the seedbank coalescent
- Adaptive Preferential Sampling in Phylodynamics With an Application to SARS-CoV-2
- Conditions for neutral speciation via isolation by distance
- Computing the joint distribution of the total tree length across loci in populations with variable size
- Dynamics of a birth-death process based on combinatorial innovation
- Estimating the relative rate of recombination to mutation in bacteria from single-locus variants using composite likelihood methods
- Mutation-selection equilibrium in games with multiple strategies
- The bounded coalescent model: conditioning a genealogy on a minimum root date
- Gaussian process-based Bayesian nonparametric inference of population size trajectories from gene genealogies
- Asymptotic genealogies of interacting particle systems with an application to sequential Monte Carlo
- Fixation probabilities in evolutionary dynamics under weak selection
- Genealogical properties of subsamples in highly fecund populations
- Hypothesis testing near singularities and boundaries
- Recent progress in coalescent theory.
- Neutral competition in a deterministically changing environment: revisiting continuum approaches
- Coalescing into the 21st century: An overview and prospects of coalescent theory
- Fixation probabilities of strategies for trimatrix games and their applications to triadic conflict
- Modeling sequence evolution in acute HIV-1 infection
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