scientific article; zbMATH DE number 6747572

From MaRDI portal
Publication:5282824

zbMath1366.92001MaRDI QIDQ5282824

John Wakeley

Publication date: 17 July 2017


Title: zbMATH Open Web Interface contents unavailable due to conflicting licenses.



Related Items (only showing first 100 items - show all)

Consistency and inconsistency of consensus methods for inferring species trees from gene trees in the presence of ancestral population structureInferring the demographic history from DNA sequences: an importance sampling approach based on non-homogeneous processesMutation-selection equilibrium in games with multiple strategiesTopological linkage disequilibrium calculated from coalescent genealogiesThe Wright-Fisher site frequency spectrum as a perturbation of the coalescent'sA compendium of covariances and correlation coefficients of coalescent tree propertiesMarkov genealogy processesAn individual-based model for the Lenski experiment, and the deceleration of the relative fitnessHow mutation affects evolutionary games on graphsProsperity is associated with instability in dynamical networksThe coalescent tree of a Markov branching process with generalised logistic growthSpatially explicit neutral models for population genetics and community ecology: extensions of the Neyman-Scott clustering processModeling sequence evolution in acute HIV-1 infectionEstimation of parameters in large offspring number models and ratios of coalescence timesEpistasis can increase multivariate trait diversity in haploid non-recombining populationsSite pattern probabilities under the multispecies coalescent and a relaxed molecular clock: theory and applicationsPartitioning, duality, and linkage disequilibria in the Moran model with recombinationAdditive genetic variation and evolvability of a multivariate trait can be increased by epistatic gene actionEnumeration of binary trees compatible with a perfect phylogenyLooking down in the ancestral selection graph: a probabilistic approach to the common ancestor type distributionSocial evolution and genetic interactions in the short and long termStatistical challenges in tracking the evolution of SARS-CoV-2Neutral community theory: How stochasticity and dispersal-limitation can explain species coexistenceVariances and covariances of linear summary statistics of segregating sitesThe process of most recent common ancestors in an evolving coalescentThe bounded coalescent model: conditioning a genealogy on a minimum root dateTokunaga and Horton self-similarity for level set trees of Markov chainsAn alternative derivation of the stationary distribution of the multivariate neutral Wright-Fisher model for low mutation rates with a view to mutation rate estimation from site frequency dataRecursions for the exchangeable partition function of the seedbank coalescentFixation probabilities in evolutionary dynamics under weak selectionA game-theoretical dynamic imitation model on networksGenealogical properties of subsamples in highly fecund populationsBayesian inference of selection in the Wright-Fisher diffusion modelNon-parametric estimation of population size changes from the site frequency spectrumAsymptotic genealogies of interacting particle systems with an application to sequential Monte CarloGenealogies and ages of cultural traits: an application of the theory of duality to the research on cultural evolutionStrong seed-bank effects in bacterial evolutionDevelopments in coalescent theory from single loci to chromosomesThe popularity spectrum applied to a cross-cultural questionThe conditional ancestral selection graph with strong balancing selectionStudy the genetic variation using eta functionsPopulation structure and coalescence in pedigrees: comparisons to the structured coalescent and a framework for inferenceMeasures of success in a class of evolutionary models with fixed population size and structureGlobal migration can lead to stronger spatial selection than local migrationExact limits of inference in coalescent modelsGeneralized population models and the nature of genetic driftOn the size distribution of private microsatellite allelesSingle-crossover recombination and ancestral recombination treesA survey of migration-selection models in population geneticsA mathematical formalism for natural selection with arbitrary spatial and genetic structureCompeting islands limit the rate of adaptation in structured populationsA probabilistic view on the deterministic mutation-selection equation: dynamics, equilibria, and ancestry via individual lines of descentIdentifiability of phylogenetic parameters from \(k\)-mer data under the coalescentIdentifying species network features from gene tree quartets under the coalescent modelAn ancestral process with selection in an ecological communityStatistical tools for seed bank detectionProbability and manipulation: evolution and simulation in applied population geneticsForward and backward evolutionary processes and allele frequency spectrum in a cancer cell populationComputing the joint distribution of the total tree length across loci in populations with variable sizeThe third moments of the site frequency spectrumPopulation growth combined with wide offspring distributions can increase fixation rate and reduce genetic diversityInference in population genetics using forward and backward, discrete and continuous time processesFixation probabilities of strategies for bimatrix games in finite populationsPhase-type distributions in population geneticsAn analytical framework in the general coalescent tree setting for analyzing polymorphisms created by two mutationsTime to the MRCA of a sample in a Wright-Fisher model with variable population sizeThe mapping of epistatic effects onto a genealogical tree in haploid populationsMultiple merger gene genealogies in two species: monophyly, paraphyly, and polyphyly for two examples of lambda coalescentsHypothesis testing near singularities and boundariesStrategy abundance in evolutionary many-player games with multiple strategiesSeparation of timescales for the seed bank diffusion and its jump-diffusion limitA non-zero variance of Tajima's estimator for two sequences even for infinitely many unlinked lociOn the joint distribution of tree height and tree length under the coalescentThe ubiquitous Ewens sampling formulaConditions for neutral speciation via isolation by distanceTree lengths for general \(\Lambda \)-coalescents and the asymptotic site frequency spectrum around the Bolthausen-Sznitman coalescentLineages-through-time plots of neutral models for speciationProbability that a sequence is lost without trace under the neutral Wright-Fisher model with recombinationNeutral competition in a deterministically changing environment: revisiting continuum approachesThe largest strongly connected component in the cyclical pedigree model of Wakeley et al.Genealogical distances under low levels of selectionLocal fluctuations of genetic processes defined on two time scales, with applications to effective size estimationThe effect of inbreeding constraints and offspring distribution on time to the most recent common ancestorBayesian-weighted triplet and quartet methods for species tree inferenceEditorial: Coalescent theory has many new branchesOn spatial coalescents with multiple mergers in two dimensionsInference in two dimensions: allele frequencies versus lengths of shared sequence blocksCoevolution fails to maintain genetic variation in a host-parasite model with constant finite population sizeTime to extinction of a cultural trait in an overlapping generation modelVariance and limiting distribution of coalescence times in a diploid model of a consanguineous populationMultivariate phase-type theory for the site frequency spectrumDynamics of a birth-death process based on combinatorial innovationEvolution in range expansions with competition at rough boundariesCoalescent models derived from birth-death processesLimiting distribution of X-chromosomal coalescence times under first-cousin consanguineous matingThe evolving Moran genealogyThe internal branch lengths of the Kingman coalescentEvolutionary multiplayer gamesEstimating the relative rate of recombination to mutation in bacteria from single-locus variants using composite likelihood methodsThe existence and abundance of ghost ancestors in biparental populations




This page was built for publication: