Cited in
(27)- DMRcaller
- RNA bioinformatics
- Bayesian estimation of differential transcript usage from RNA-seq data
- A compositional model to assess expression changes from single-cell RNA-seq data
- Bayesian analysis of RNA-Seq data using a family of negative binomial models
- edgeR
- RankProd
- casper
- BaySeq
- DEseq
- QuasiSeq
- ShrinkBayes
- svaseq
- DiffSplice
- DoubleExpSeq
- RSEM
- TopHat
- deconvolveR
- EmpDiff
- DRIMSeq
- IUTA
- rSeqDiff
- SpliceTrap
- A Markov random field-based approach for joint estimation of differentially expressed genes in mouse transcriptome data
- What if we ignore the random effects when analyzing RNA-seq data in a multifactor experiment
- Shrinkage of dispersion parameters in the binomial family, with application to differential exon skipping
- Empirical likelihood tests for nonparametric detection of differential expression from RNA-seq data
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