Bowtie 2
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Software:40904
swMATH29190MaRDI QIDQ40904FDOQ40904
Author name not available (Why is that?)
Source code repository: https://github.com/BenLangmead/bowtie2
Cited In (23)
- Global and local sequence alignment with a bounded number of gaps
- Algorithmic Framework for Approximate Matching Under Bounded Edits with Applications to Sequence Analysis
- CUSHAW Suite: Parallel and Efficient Algorithms for NGS Read Alignment
- Approximate search of short patterns with high error rates using the \(01^\ast 0\) lossless seeds
- An Efficient Approach to Merging Paired-End Reads and Incorporation of Uncertainties
- Comparative Assessment of Alignment Algorithms for NGS Data: Features, Considerations, Implementations, and Future
- Error Correction in Methylation Profiling From NGS Bisulfite Protocols
- String-Matching and Alignment Algorithms for Finding Motifs in NGS Data
- Long Reads Enable Accurate Estimates of Complexity of Metagenomes
- Modeling association in microbial communities with clique loglinear models
- Graph algorithms for DNA sequencing -- origins, current models and the future
- Computational Genomics with R
- AStarix: Fast and Optimal Sequence-to-Graph Alignment
- Refining the \(r\)-index
- Accurate Reconstruction of Microbial Strains from Metagenomic Sequencing Using Representative Reference Genomes
- ThIEF: Finding Genome-wide Trajectories of Epigenetics Marks
- Title not available (Why is that?)
- Title not available (Why is that?)
- Fast and optimal sequence-to-graph alignment guided by seeds
- A resource-frugal probabilistic dictionary and applications in bioinformatics
- FM-index of alignment with gaps
- A novel specialized single-linkage clustering algorithm for taxonomically ordered data
- G-MAPSEQ -- a new method for mapping reads to a reference genome
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