Circular binary segmentation for the analysis of array-based DNA copy number data
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Cited in
(only showing first 100 items - show all)- Alternating Pruned Dynamic Programming for Multiple Epidemic Change-Point Estimation
- A shape-based cutting and clustering algorithm for multiple change-point detection
- Segmented multiple-Lasso and peak recognition algorithm for change-point detection
- Narrowest-Over-Threshold Detection of Multiple Change Points and Change-Point-Like Features
- Changepoint Detection in the Presence of Outliers
- Sparse integrative clustering of multiple omics data sets
- Modeling a nonlinear biophysical trend followed by long-memory equilibrium with unknown change point
- Quick Adaptive Ternary Segmentation: An Efficient Decoding Procedure For Hidden Markov Models
- A Modified Bayes Information Criterion with Applications to the Analysis of Comparative Genomic Hybridization Data
- Real Time Anomaly Detection And Categorisation
- Subset Multivariate Collective and Point Anomaly Detection
- Segmentation and estimation for SNP microarrays: A Bayesian multiple change-point approach
- Modeling association between DNA copy number and gene expression with constrained piecewise linear regression splines
- Detecting possibly frequent change-points: wild binary segmentation 2 and steepest-drop model selection
- The screening and ranking algorithm to detect DNA copy number variations
- A Bayesian HMM with random effects and an unknown number of states for DNA copy number analysis
- s-SaRa: a stable and powerful algorithm for DNA copy number variation detection
- Mining events with declassified diplomatic documents
- Identifying multiple change points in a linear mixed effects model
- Post‐selection inference for changepoint detection algorithms with application to copy number variation data
- Fast estimation of posterior probabilities in change-point analysis through a constrained hidden Markov model
- Consistency of a range of penalised cost approaches for detecting multiple changepoints
- A latent variable model with change-points and its application to time pressure effects in educational assessment
- Relating and comparing methods for detecting changes in mean
- Detection of candidate tumor driver genes using a fully integrated Bayesian approach
- Detecting simultaneous variant intervals in aligned sequences
- Multiple hypothesis testing adjusted for latent variables, with an application to the AGEMAP gene expression data
- Optimal multiple change-point detection for high-dimensional data
- ^2 inference for change points in high-dimensional time series via a two-way MOSUM
- A heuristic, iterative algorithm for change-point detection in abrupt change models
- Tail-greedy bottom-up data decompositions and fast multiple change-point detection
- Parallelization of a Common Changepoint Detection Method
- Detecting multiple generalized change-points by isolating single ones
- Computationally efficient whole-genome signal region detection for quantitative and binary traits
- Moment estimation in discrete shifting level model applied to fast array-CGH segmentation
- Nonparametric Testing for DNA Copy Number Induced Differential mRNA Gene Expression
- A semiparametric change-point regression model for longitudinal observations
- Changepoint detection in non-exchangeable data
- Time series analysis of COVID-19 infection curve: a change-point perspective
- Multiple change-point detection: a selective overview
- New efficient algorithms for multiple change-point detection with reproducing kernels
- Covariate assisted screening and estimation
- Subsampling methods for genomic inference
- Optimal detection of changepoints with a linear computational cost
- High dimensional change point estimation via sparse projection
- A nonparametric approach for multiple change point analysis of multivariate data
- Bootstrap-based inference for multiple mean-variance changepoint models
- Ms.FPOP: A Fast Exact Segmentation Algorithm with a Multiscale Penalty
- Autocovariance estimation in regression with a discontinuous signal and m-dependent errors: a difference-based approach
- Detecting weak changes in the mean of a class of nonlinear heteroscedastic models
- A comparison of single and multiple changepoint techniques for time series data
- Circulating nucleic acids in plasma and serum V. Papers based on the presentations at the 5th international conference on circulating nucleic acids in plasma and serum, Moscow, Russia, August 23--27, 2007.
- Multiscale change point inference. With discussion and authors' reply
- Unraveling S\&P\(500\) stock volatility and networks -- an encoding-and-decoding approach
- Change-point detection for variance piecewise constant models
- Segmentation and estimation of change-point models: false positive control and confidence regions
- Multiple change-points detection by empirical Bayesian information criteria and Gibbs sampling induced stochastic search
- Detecting change points in the stress-strength reliability \(P(X < Y)\)
- Identification of differential aberrations in multiple-sample array CGH studies
- Multiscale change-point segmentation: beyond step functions
- Graph-based change-point detection
- A shifting level model algorithm that identifies aberrations in array-CGH data
- A computationally efficient nonparametric approach for changepoint detection
- Constrained energy variation for change point detection
- Detecting linear trend changes in data sequences
- A sequential feature selection approach to change point detection in mean-shift change point models
- Asymptotic of the number of false change points of the fused lasso signal approximator
- Detecting Changes in Covariance via Random Matrix Theory
- Change-point detection of cognitive states across multiple trials in functional neuroimaging
- Change-points: from sequential detection to biology and back
- PICNIC: an algorithm to predict absolute allelic copy number variation with microarray cancer data
- Robust change point detection for high-dimensional linear models with tolerance for outliers and heavy tails
- Multiscale blind source separation
- Multiple change point detection and validation in autoregressive time series data
- A very fast and accurate method for calling aberrations in array-CGH data
- A Bayesian approach to inference about a change point model with application to DNA copy number experimental data
- A Bayesian approach for locating change points in a compound Poisson process with application to detecting DNA copy number variations
- Fluctuation bounds for continuous time branching processes and evolution of growing trees with a change point
- Greedy Segmentation for a Functional Data Sequence
- A study of biases of DNA copy number estimation based on PICR model
- High-dimensional change-point detection under sparse alternatives
- Identifying multiple changes for a functional data sequence with application to freeway traffic segmentation
- Cross-validation for change-point regression: pitfalls and solutions
- An online copy number variant detection method for short sequencing reads
- Bayesian uncertainty quantification and structure detection for multiple change points models
- Simultaneous Detection of Signal Regions Using Quadratic Scan Statistics With Applications to Whole Genome Association Studies
- A pruned recursive solution to the multiple change point problem
- Bayesian multiple change-points detection in a normal model with heterogeneous variances
- Improving power by conditioning on less in post-selection inference for changepoints
- Clustering-based method for developing a genomic copy number alteration signature for predicting the metastatic potential of prostate cancer
- Research in Computational Molecular Biology
- Tuning parameter selection in fused lasso signal approximator with false discovery rate control
- A semiparametric Bayesian model for comparing DNA copy numbers
- Allele-specific copy number estimation by whole exome sequencing
- Change-point model on nonhomogeneous Poisson processes with application in copy number profiling by next-generation DNA sequencing
- Change detection using an iterative algorithm with guarantees
- Identifying clusters in spatial data via sequential importance sampling
- A statistical method to detect chromosomal regions with DNA copy number alterations using SNP-array-based CGH data
- Equivariant variance estimation for multiple change-point model
- Hidden Markov models for the assessment of chromosomal alterations using high-throughput SNP arrays
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