Identifiability of chemical reaction networks
From MaRDI portal
Publication:937700
DOI10.1007/s10910-007-9307-xzbMath1145.92040OpenAlexW2038006683MaRDI QIDQ937700
Gheorghe Craciun, Casian Pantea
Publication date: 15 August 2008
Published in: Journal of Mathematical Chemistry (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1007/s10910-007-9307-x
Classical flows, reactions, etc. in chemistry (92E20) Applications of dynamical systems (37N99) General theory for ordinary differential equations (34A99)
Related Items
Estimation of parameters in a structured SIR model ⋮ Disguised toric dynamical systems ⋮ Algebraic methods for inferring biochemical networks: a maximum likelihood approach ⋮ Complete characterization for the fit-preserving data refinement of mass-action reaction networks ⋮ Comment on ``Identifiability of chemical reaction networks by G. Craciun and C. Pantea ⋮ Statistical Model for Biochemical Network Inference ⋮ Computing sparse and dense realizations of reaction kinetic systems ⋮ Absolute concentration robustness in networks with low-dimensional stoichiometric subspace ⋮ First-order chemical reaction networks. I: Theoretical considerations ⋮ A linear programming approach to dynamical equivalence, linear conjugacy, and the deficiency one theorem ⋮ Linear conjugacy in biochemical reaction networks with rational reaction rates ⋮ Chemical reaction systems with a homoclinic bifurcation: an inverse problem ⋮ Joining and decomposing reaction networks ⋮ Computing all possible graph structures describing linearly conjugate realizations of kinetic systems ⋮ Computing zero deficiency realizations of kinetic systems ⋮ Parameter estimation for models of chemical reaction networks from experimental data of reaction rates ⋮ An Algorithm for Finding Weakly Reversible Deficiency Zero Realizations of Polynomial Dynamical Systems ⋮ Delay stability of reaction systems ⋮ The Disguised Toric Locus and Affine Equivalence of Reaction Networks ⋮ Source-Only Realizations, Weakly Reversible Deficiency One Networks, and Dynamical Equivalence ⋮ A linear programming approach to weak reversibility and linear conjugacy of chemical reaction networks ⋮ On the connectivity of the disguised toric locus of a reaction network ⋮ Weakly reversible single linkage class realizations of polynomial dynamical systems: an algorithmic perspective ⋮ On classes of reaction networks and their associated polynomial dynamical systems ⋮ Dynamic optimization of a gas-liquid reactor ⋮ Identification of affine dynamical systems from a single trajectory ⋮ A computational approach to linear conjugacy in a class of power law kinetic systems ⋮ Weak identifiability for differential algebraic systems ⋮ Linear conjugacy of chemical reaction networks ⋮ An inverse problem in reaction kinetics ⋮ A tutorial on chemical reaction network dynamics ⋮ Data-driven, variational model reduction of high-dimensional reaction networks ⋮ Reaction network realizations of rational biochemical systems and their structural properties ⋮ Identifiability from a few species for a class of biochemical reaction networks ⋮ Network inference and biological dynamics ⋮ Product-Form Poisson-Like Distributions and Complex Balanced Reaction Systems ⋮ An Efficient Characterization of Complex-Balanced, Detailed-Balanced, and Weakly Reversible Systems ⋮ Linear conjugacy of chemical kinetic systems ⋮ Realizations of kinetic differential equations ⋮ The QSSA in Chemical Kinetics: As Taught and as Practiced ⋮ Uniqueness of weakly reversible and deficiency zero realizations of dynamical systems ⋮ Single-target networks ⋮ Analysis of mass-action systems by split network translation ⋮ A minimal model of self-consistent partial synchrony ⋮ Identifiability of stochastically modelled reaction networks ⋮ A computational approach to the structural analysis of uncertain kinetic systems ⋮ COMPUTING ALL SPARSE KINETIC STRUCTURES FOR A LORENZ SYSTEM USING OPTIMIZATION ⋮ The smallest bimolecular mass action reaction networks admitting Andronov–Hopf bifurcation
Cites Work
- Unnamed Item
- Unnamed Item
- Reaction routes in biochemical reaction systems: algebraic properties, validated calculation procedure and example from nucleotide metabolism
- The existence and uniqueness of steady states for a class of chemical reaction networks
- Multiple steady states for chemical reaction networks of deficiency one
- Structure and stability of certain chemical networks and applications to the kinetic proofreading model of T-cell receptor signal transduction
- Understanding bistability in complex enzyme-driven reaction networks
- Multiple Equilibria in Complex Chemical Reaction Networks: I. The Injectivity Property
- Multiple Equilibria in Complex Chemical Reaction Networks: II. The Species-Reaction Graph
- Convex Analysis