swMATH2515MaRDI QIDQ15054FDOQ15054
Author name not available (Why is that?)
Official website: http://bioinformatics.oxfordjournals.org/content/29/1/15.short
Cited In (only showing first 100 items - show all)
- Comparative assessment of alignment algorithms for NGS data: features, considerations, implementations, and future
- A statistical method for detecting differentially expressed SNVs based on next-generation RNA-seq data
- Data mining techniques for the life sciences
- Statistical genomics. Methods and protocols
- SpliceTAPyR -- an efficient method for transcriptome alignment
- A Family of Tree-Based Generators for Bubbles in Directed Graphs
- RNA bioinformatics
- On bubble generators in directed graphs
- BioMart
- BSgenome
- BEDTools
- NGS QC Toolkit
- featureCounts
- RSEM
- Gviz
- MEDIPS
- recount
- TopHat
- Title not available (Why is that?)
- Linearity tests and stochastic trend under the STAR framework
- g Profiler
- chequeR
- MMDiff
- HIVE-hexagon
- Bismark
- DEXUS
- DRIMSeq
- VarScan
- clusterProfiler
- HISAT
- Mash
- RNASeqR
- systemPipeR
- SNVMix
- MapSplice
- Salmon
- gfpop
- abSNP
- GlfMultiples
- BatMeth
- CAP-miRSeq
- Sniper
- CUSHAW
- MAP-RSeq
- Pash
- PSAR-Align
- Socrates
- PePr
- sansSouci
- STAR
- MAnorm
- Analysis of expression profile and gene variation via development of methods for next generation sequencing data
- Computational genomics with R. With the assistance of Verdan Franke, Bora Uyar and Jonathan Ronen
- Missing value imputation for gene expression data by tailored nearest neighbors
- abSNP: RNA-Seq SNP calling in repetitive regions via abundance estimation
- MIRA
- GlobPlot
- edgeR
- tRNAscan-SE
- Soap
- ARSyN
- AUGUSTUS
- GATK
- SOPRA
- flowCore
- Voom
- Samtools
- ANNOTATOR
- ADP_EM
- ANCHOR
- Aber-OWL
- DBAli tools
- CUPSAT
- DUET
- ENCoM
- Brain
- ESpritz
- FUGUE
- GenePattern
- ARAGORN
- FoldUnfold
- HHblits
- APOLLO
- ANNIE
- LIGPLOT
- antiSMASH
- HTSeq
- Galaxy
- CISA
- MATRAS
- FUNC
- FastQC
- MAESTRO
- CCMpred
- IUPred
- GOSemSim
- CONFOLD
- NUCPLOT
- MeDor
- MetaDisorder
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