DEseq

From MaRDI portal
Revision as of 20:21, 5 March 2024 by Import240305080343 (talk | contribs) (Created automatically from import240305080343)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)

Software:22305



swMATH10344MaRDI QIDQ22305


No author found.





Related Items (59)

What if we ignore the random effects when analyzing RNA-seq data in a multifactor experimentA Markov random field-based approach for joint estimation of differentially expressed genes in mouse transcriptome dataShrinkage of dispersion parameters in the binomial family, with application to differential exon skippingA semi-parametric Bayesian approach for detection of gene expression heterosis with RNA-seq dataPoisson mean vector estimation with nonparametric maximum likelihood estimation and application to protein domain dataNo counts, no variance: allowing for loss of degrees of freedom when assessing biological variability from RNA-seq dataBayesian mixed effects models for zero-inflated compositions in microbiome data analysisA statistical method for detecting differentially expressed SNVs based on next‐generation RNA‐seq dataStatistical calibration of qRT-PCR, microarray and RNA-Seq gene expression data with measurement error modelsA finite mixture approach to joint clustering of individuals and multivariate discrete outcomesUnnamed ItemToward an Efficient Computation of Log-Likelihood Functions in Statistical Inference: Overdispersed Count Data ClusteringKinetic Foundation of the Zero-Inflated Negative Binomial Model for Single-Cell RNA Sequencing DataA semi-parametric Bayesian approach for differential expression analysis of RNA-seq dataDetecting differentially expressed genes with RNA-seq data using backward selection to account for the effects of relevant covariatesHierarchical modeling and differential expression analysis for RNA-seq experiments with inbred and hybrid genotypesSome approximation results for Bayesian posteriors that involve the Hurwitz-Lerch zeta distributionNon parametric Bayesian analysis of the two-sample problem with censoringMATHT: a web server for comprehensive transcriptome data analysisModeling read counts for CNV detection in exome sequencing dataThe NBP negative binomial model for assessing differential gene expression from RNA-SeqA two-stage Poisson model for testing RNA-Seq dataIdentifying atypically expressed chromosome regions using RNA-Seq dataOn computing maximum likelihood estimates for the negative binomial distribution\(e\)PCA: high dimensional exponential family PCA\(p\)-value calibration for multiple testing problems in genomicsEstimation and testing of gene expression heterosisModel-based feature selection and clustering of RNA-seq data for unsupervised subtype discoveryInference of large modified Poisson-type graphical models: application to RNA-seq data in childhood atopic asthma studiesA compositional model to assess expression changes from single-cell RNA-seq dataDetecting rare and faint signals via thresholding maximum likelihood estimatorsControlling the false-discovery rate by procedures adapted to the length bias of RNA-seqBeyond support in two-stage variable selectionA simulation framework for correlated count data of features subsets in high-throughput sequencing or proteomics experimentsStatistical analysis of next generation sequencing dataSample size calculation based on generalized linear models for differential expression analysis in RNA-seq dataBayesian hidden Markov models to identify RNA–protein interaction sites in PAR‐CLIPA Bayesian mixture model for chromatin interaction dataA bioequivalence test by the direct comparison of concentration-versus-time curves using local polynomial smoothersTwo-sample test for sparse high-dimensional multinomial distributionsDetecting Differential Expression in RNA-sequence Data Using Quasi-likelihood with Shrunken Dispersion EstimatesOn the estimation of mixtures of Poisson regression models with large number of componentsBNP-Seq: Bayesian Nonparametric Differential Expression Analysis of Sequencing Count DataA model selection criterion for model-based clustering of annotated gene expression dataHomology cluster differential expression analysis for interspecies mRNA-seq experimentsEmpirical likelihood tests for nonparametric detection of differential expression from RNA-seq dataUnnamed ItemNetwork modeling in biology: statistical methods for gene and brain networksFully Bayesian analysis of allele-specific RNA-seq dataDevelopment of a tissue augmented Bayesian model for expression quantitative trait loci analysisA parametric model fitting time to first event for overdispersed data: application to time to relapse in multiple sclerosisInteractive Visualization of Hierarchically Structured DataEstimation of sparse directed acyclic graphs for multivariate counts dataModeling overdispersion heterogeneity in differential expression analysis using mixturesClassification and clustering of sequencing data using a Poisson modelTropical Sufficient Statistics for Persistent HomologySample size calculations for the differential expression analysis of RNA-seq data using a negative binomial regression modelA statistical perspective on the challenges in molecular microbial biologyAn Optimal Test with Maximum Average Power While Controlling FDR with Application to RNA‐Seq Data


This page was built for software: DEseq